Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DDX1Q92499 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 AC007950.2-201ENST00000615045 2347 ntBASIC17.49■□□□□ 0.39
DDX1Q92499 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
DDX1Q92499 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX1Q92499 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.49■□□□□ 0.39
DDX1Q92499 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DDX1Q92499 AC099522.2-201ENST00000607001 744 ntBASIC17.49■□□□□ 0.39
DDX1Q92499 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
DDX1Q92499 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
DDX1Q92499 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
DDX1Q92499 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX1Q92499 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DDX1Q92499 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX1Q92499 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX1Q92499 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX1Q92499 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX1Q92499 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.48■□□□□ 0.39
DDX1Q92499 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
DDX1Q92499 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX1Q92499 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX1Q92499 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX1Q92499 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX1Q92499 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX1Q92499 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX1Q92499 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX1Q92499 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
DDX1Q92499 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX1Q92499 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DDX1Q92499 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX1Q92499 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX1Q92499 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX1Q92499 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DDX1Q92499 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
DDX1Q92499 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.47■□□□□ 0.39
DDX1Q92499 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX1Q92499 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
DDX1Q92499 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms