Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 KRT18P27-201ENST00000427733 1299 ntBASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 KRT18P56-201ENST00000507275 550 ntBASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 AC021087.4-201ENST00000563761 564 ntBASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 AC107918.4-202ENST00000641623 219 ntBASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.52■□□□□ 0.23
SLC44A1Q8WWI5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC44A1Q8WWI5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
SLC44A1Q8WWI5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC44A1Q8WWI5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 MST1L-201ENST00000442552 2185 ntBASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 AL121772.3-201ENST00000610840 674 ntBASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 REXO1L6P-202ENST00000619970 1078 ntBASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC44A1Q8WWI5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TSPY26P-202ENST00000565928 3884 ntBASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AC092919.2-201ENST00000623631 1645 ntBASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AC073621.1-201ENST00000392730 636 ntBASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC44A1Q8WWI5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms