Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 AP000344.2-201ENST00000512987 629 ntBASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 AC027796.2-201ENST00000575326 344 ntBASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSMEM1Q8WWF3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 AC092068.3-201ENST00000587894 2016 ntBASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SSMEM1Q8WWF3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 SLC25A1P3-201ENST00000395415 828 ntBASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSMEM1Q8WWF3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 PCDHA1-201ENST00000378133 2726 ntBASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 AC002056.1-201ENST00000395613 760 ntBASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 AL031432.2-201ENST00000566714 459 ntBASIC13.69□□□□□ -0.22
SSMEM1Q8WWF3 AL928711.1-201ENST00000570165 459 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms