Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 YBX1P5-201ENST00000509441 847 ntBASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC243562.1-201ENST00000560672 389 ntBASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 AC005498.2-205ENST00000593218 784 ntBASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM3Q8TF72 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 AL138918.1-201ENST00000568306 659 ntBASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM3Q8TF72 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AC004461.1-201ENST00000412461 403 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AL355306.1-201ENST00000415580 579 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AL627223.1-201ENST00000416693 442 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 RNA5SP410-201ENST00000516285 106 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AC190387.1-201ENST00000551683 408 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AC073389.1-201ENST00000595595 795 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms