Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 AL138828.2-201ENST00000615812 383 ntBASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHKBP1Q8TBC3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 DOC2GP-204ENST00000639052 2548 ntBASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHKBP1Q8TBC3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 LINC00554-201ENST00000564841 3011 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 KRT8P39-201ENST00000396270 1433 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SERBP1P5-201ENST00000510079 1181 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SPTSSB-204ENST00000617024 1292 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 AC079328.2-201ENST00000561241 3354 ntBASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms