Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 LINC00895-201ENST00000629028 1637 ntBASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 PRYP5-201ENST00000451909 266 ntBASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 KRT8P49-201ENST00000604166 1432 ntBASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIML2Q8N7C3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 NCF1C-201ENST00000438382 1427 ntBASIC16■□□□□ 0.15
TRIML2Q8N7C3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIML2Q8N7C3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRIML2Q8N7C3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms