Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH20Q8N6Y1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AL627223.1-201ENST00000416693 442 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AC005237.2-201ENST00000434368 219 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AC023141.5-201ENST00000458585 616 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 HLA-J-202ENST00000469281 1241 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 IGHV3-62-201ENST00000520057 340 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDH20Q8N6Y1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH20Q8N6Y1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH20Q8N6Y1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH20Q8N6Y1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH20Q8N6Y1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 KRT18P28-201ENST00000453838 1332 ntBASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 AC008267.7-201ENST00000624570 1194 ntBASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 AL162727.3-201ENST00000635661 2787 ntBASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
PCDH20Q8N6Y1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms