Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AP3S2-216ENST00000617003 1561 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AL139400.1-201ENST00000366220 510 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SPDYE14P-201ENST00000442619 822 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AC026150.2-201ENST00000564693 1156 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 RARRES2P9-201ENST00000565168 469 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 AP001059.3-201ENST00000619053 235 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 AC109322.1-201ENST00000524499 1264 ntBASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 AL512356.2-201ENST00000546955 174 ntBASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 AC024267.1-201ENST00000582320 895 ntBASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 AL365330.1-201ENST00000607459 531 ntBASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 REXO1L8P-201ENST00000604378 1897 ntBASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAM1L1Q8N609 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 METTL21AP1-201ENST00000438852 635 ntBASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 RNA5SP410-201ENST00000516285 106 ntBASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 AC004449.1-201ENST00000564240 433 ntBASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAM1L1Q8N609 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAM1L1Q8N609 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms