Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.88■□□□□ 0.45
VPS52Q8N1B4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 MIR4453-201ENST00000584019 89 ntBASIC17.87■□□□□ 0.45
VPS52Q8N1B4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 LINC02560-201ENST00000596379 459 ntBASIC17.87■□□□□ 0.45
VPS52Q8N1B4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VPS52Q8N1B4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 SLC25A1P3-201ENST00000395415 828 ntBASIC17.86■□□□□ 0.45
VPS52Q8N1B4 AC005034.1-201ENST00000426657 489 ntBASIC17.86■□□□□ 0.45
VPS52Q8N1B4 FAM207CP-201ENST00000443486 507 ntBASIC17.86■□□□□ 0.45
VPS52Q8N1B4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 AL138918.1-201ENST00000568306 659 ntBASIC17.86■□□□□ 0.45
VPS52Q8N1B4 AC008761.3-201ENST00000624803 892 ntBASIC17.86■□□□□ 0.45
VPS52Q8N1B4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS52Q8N1B4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms