Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 AC005622.1-201ENST00000636801 1703 ntBASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 IGLL3P-201ENST00000412472 434 ntBASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 RNA5SP419-201ENST00000515908 135 ntBASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 UNC93B6-202ENST00000528242 690 ntBASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC83Q8IWF9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 PRSS29P-201ENST00000440800 595 ntBASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 AL513480.1-201ENST00000451731 511 ntBASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 AL031055.1-201ENST00000606362 631 ntBASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC83Q8IWF9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 AC009947.1-201ENST00000444350 727 ntBASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms