Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 AP002414.2-201ENST00000591780 3365 ntBASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NUDCD3Q8IVD9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 AC074051.2-201ENST00000565115 352 ntBASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 AP002414.4-201ENST00000589764 1148 ntBASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUDCD3Q8IVD9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AL031133.1-201ENST00000406807 723 ntBASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AP002383.4-201ENST00000442518 975 ntBASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AC131009.4-201ENST00000624048 1740 ntBASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 AL356309.3-201ENST00000624132 1934 ntBASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUDCD3Q8IVD9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms