Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AC005622.1-201ENST00000636801 1703 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AP3S2-216ENST00000617003 1561 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 FAM220BP-201ENST00000377689 816 ntBASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM4Q86VH4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AL589702.1-201ENST00000641229 1509 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 RNA5SP410-201ENST00000516285 106 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AC069262.1-201ENST00000539058 672 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 MIR6080-201ENST00000617359 66 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 Z92544.3-201ENST00000624747 417 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 U82695.1-201ENST00000635752 1889 ntBASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms