Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL079307.3-201ENST00000556114 283 ntBASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE3BQ7Z3V4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 U82695.1-201ENST00000635752 1889 ntBASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 LINC02560-201ENST00000596379 459 ntBASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 AL844908.2-201ENST00000609461 460 ntBASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 AD000864.1-201ENST00000624076 2295 ntBASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE3BQ7Z3V4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 ALOX12P2-203ENST00000570921 1945 ntBASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 AC022144.1-201ENST00000602255 1580 ntBASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 AC008761.3-201ENST00000624803 892 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms