Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 RN7SL618P-201ENST00000477850 296 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 AC011495.1-201ENST00000498085 584 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 AC010336.2-201ENST00000564226 506 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 IGHV3-72-202ENST00000621503 303 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PP12613-201ENST00000424958 2230 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 AC141586.5-201ENST00000624546 2050 ntBASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC149Q6ZUS6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 AL645728.1-201ENST00000366221 2101 ntBASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 DGCR5-201ENST00000399539 862 ntBASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 AL512384.1-201ENST00000406683 331 ntBASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 GNAQP1-201ENST00000444815 1067 ntBASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC149Q6ZUS6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC149Q6ZUS6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC149Q6ZUS6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC149Q6ZUS6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC149Q6ZUS6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC149Q6ZUS6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms