Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 MIR3909-201ENST00000579518 119 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AC004835.2-201ENST00000603762 682 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AC092850.2-201ENST00000623821 2697 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 WASH6P-202ENST00000359512 1437 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AKAP8P1-201ENST00000434743 1349 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 KRT18P28-201ENST00000453838 1332 ntBASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD3Q6PCD5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 MST1L-201ENST00000442552 2185 ntBASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 METTL21AP1-201ENST00000438852 635 ntBASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 AL592309.1-201ENST00000443127 649 ntBASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 AC093520.2-201ENST00000561830 333 ntBASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 AC006449.5-201ENST00000610658 2098 ntBASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD3Q6PCD5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 RN7SL589P-201ENST00000481268 310 ntBASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 AC021097.1-201ENST00000607902 574 ntBASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
RFWD3Q6PCD5 KRT8P39-201ENST00000396270 1433 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms