Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC27A1Q6PCB7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC27A1Q6PCB7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 FLJ38576-201ENST00000623820 2459 ntBASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC27A1Q6PCB7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC236430.1-201ENST00000402231 743 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 MRPS18AP1-201ENST00000414458 589 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AL080243.2-201ENST00000418783 582 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC002472.2-201ENST00000442739 958 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 FAM207CP-201ENST00000443486 507 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 RN7SL204P-201ENST00000582831 262 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 MIR4321-201ENST00000592276 80 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC022144.1-201ENST00000602255 1580 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 AC087499.5-201ENST00000452760 1342 ntBASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC27A1Q6PCB7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC27A1Q6PCB7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC27A1Q6PCB7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC27A1Q6PCB7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC27A1Q6PCB7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC27A1Q6PCB7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms