Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 MTND6P24-201ENST00000440466 518 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 BANF1P1-201ENST00000553684 263 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AC061975.2-201ENST00000581722 295 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 MIR3197-201ENST00000582241 73 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AC024267.1-201ENST00000582320 895 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 RN7SL828P-201ENST00000607615 303 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AC073592.8-201ENST00000624126 511 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AL035456.1-201ENST00000456064 1369 ntBASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SWSAP1Q6NVH7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 LTB4R2-202ENST00000528054 3092 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AC005052.1-201ENST00000625181 2492 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PCDHA12-202ENST00000613593 2588 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AL138828.2-201ENST00000615812 383 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SPDYE12P-201ENST00000618416 771 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 ALOX12P2-203ENST00000570921 1945 ntBASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SWSAP1Q6NVH7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms