Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.37■□□□□ 0.37
VARS2Q5ST30 AL080243.2-201ENST00000418783 582 ntBASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC009477.1-201ENST00000452936 217 ntBASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 AC087499.5-201ENST00000452760 1342 ntBASIC17.37■□□□□ 0.37
VARS2Q5ST30 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VARS2Q5ST30 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 GGT3P-204ENST00000453783 1664 ntBASIC17.36■□□□□ 0.37
VARS2Q5ST30 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AC132872.1-201ENST00000566986 1195 ntBASIC17.36■□□□□ 0.37
VARS2Q5ST30 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AL844908.2-201ENST00000609461 460 ntBASIC17.36■□□□□ 0.37
VARS2Q5ST30 AC009118.2-201ENST00000613275 655 ntBASIC17.36■□□□□ 0.37
VARS2Q5ST30 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARS2Q5ST30 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARS2Q5ST30 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 HLA-A-202ENST00000376806 1854 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms