Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 AL589702.1-201ENST00000641229 1509 ntBASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
PRICKLE4Q2TBC4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 FOXO1B-201ENST00000504678 1527 ntBASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 LINC01225-203ENST00000563550 1244 ntBASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 AC105339.1-204ENST00000636249 355 ntBASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE4Q2TBC4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AL391005.1-201ENST00000623953 2435 ntBASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE4Q2TBC4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC026691.1-201ENST00000602502 2017 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms