Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.06■□□□□ 0.48
NFX1Q12986 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.06■□□□□ 0.48
NFX1Q12986 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.06■□□□□ 0.48
NFX1Q12986 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.06■□□□□ 0.48
NFX1Q12986 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.06■□□□□ 0.48
NFX1Q12986 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NFX1Q12986 AL138828.2-201ENST00000615812 383 ntBASIC18.06■□□□□ 0.48
NFX1Q12986 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NFX1Q12986 SNX33P1-201ENST00000592116 1762 ntBASIC18.06■□□□□ 0.48
NFX1Q12986 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NFX1Q12986 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFX1Q12986 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NFX1Q12986 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.05■□□□□ 0.48
NFX1Q12986 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 AL353705.2-201ENST00000428243 662 ntBASIC18.05■□□□□ 0.48
NFX1Q12986 MTND6P24-201ENST00000440466 518 ntBASIC18.05■□□□□ 0.48
NFX1Q12986 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.05■□□□□ 0.48
NFX1Q12986 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NFX1Q12986 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.05■□□□□ 0.48
NFX1Q12986 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
NFX1Q12986 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.05■□□□□ 0.48
NFX1Q12986 AL391256.1-201ENST00000443260 1855 ntBASIC18.05■□□□□ 0.48
NFX1Q12986 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NFX1Q12986 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.05■□□□□ 0.48
NFX1Q12986 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFX1Q12986 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.04■□□□□ 0.48
NFX1Q12986 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 AC005034.1-201ENST00000426657 489 ntBASIC18.04■□□□□ 0.48
NFX1Q12986 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.04■□□□□ 0.48
NFX1Q12986 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 RNA5SP410-201ENST00000516285 106 ntBASIC18.04■□□□□ 0.48
NFX1Q12986 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.04■□□□□ 0.48
NFX1Q12986 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.04■□□□□ 0.48
NFX1Q12986 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
NFX1Q12986 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFX1Q12986 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NFX1Q12986 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFX1Q12986 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFX1Q12986 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NFX1Q12986 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms