Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.69■■□□□ 1.06
COL16A1Q07092 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
COL16A1Q07092 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.68■■□□□ 1.06
COL16A1Q07092 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC21.68■■□□□ 1.06
COL16A1Q07092 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.68■■□□□ 1.06
COL16A1Q07092 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.68■■□□□ 1.06
COL16A1Q07092 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.68■■□□□ 1.06
COL16A1Q07092 CU633904.3-201ENST00000624042 1029 ntBASIC21.68■■□□□ 1.06
COL16A1Q07092 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 AL031731.1-201ENST00000642131 2094 ntBASIC21.68■■□□□ 1.06
COL16A1Q07092 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL16A1Q07092 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.67■■□□□ 1.06
COL16A1Q07092 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL16A1Q07092 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.67■■□□□ 1.06
COL16A1Q07092 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
COL16A1Q07092 SLED1-202ENST00000512051 380 ntBASIC21.67■■□□□ 1.06
COL16A1Q07092 AC044849.1-201ENST00000519737 1188 ntBASIC21.67■■□□□ 1.06
COL16A1Q07092 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.67■■□□□ 1.06
COL16A1Q07092 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.67■■□□□ 1.06
COL16A1Q07092 AL133499.1-201ENST00000596207 608 ntBASIC21.67■■□□□ 1.06
COL16A1Q07092 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.67■■□□□ 1.06
COL16A1Q07092 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
COL16A1Q07092 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL16A1Q07092 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COL16A1Q07092 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.66■■□□□ 1.06
COL16A1Q07092 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 AL138688.1-201ENST00000624851 1594 ntBASIC21.66■■□□□ 1.06
COL16A1Q07092 BICD1-207ENST00000551848 1962 ntBASIC21.66■■□□□ 1.06
COL16A1Q07092 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 AL354751.1-201ENST00000412768 1863 ntBASIC21.66■■□□□ 1.06
COL16A1Q07092 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.66■■□□□ 1.06
COL16A1Q07092 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 MIR769-201ENST00000390225 118 ntBASIC21.66■■□□□ 1.06
COL16A1Q07092 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.66■■□□□ 1.06
COL16A1Q07092 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.66■■□□□ 1.06
COL16A1Q07092 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL16A1Q07092 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.66■■□□□ 1.06
COL16A1Q07092 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL16A1Q07092 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COL16A1Q07092 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL16A1Q07092 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
COL16A1Q07092 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
COL16A1Q07092 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.65■■□□□ 1.06
COL16A1Q07092 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.65■■□□□ 1.06
COL16A1Q07092 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL16A1Q07092 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL16A1Q07092 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL16A1Q07092 AC126915.1-201ENST00000522847 1038 ntBASIC21.65■■□□□ 1.06
COL16A1Q07092 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms