Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AC126335.2-201ENST00000623362 4637 ntBASIC16.82■□□□□ 0.28
GABPB1Q06547 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
GABPB1Q06547 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.82■□□□□ 0.28
GABPB1Q06547 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.82■□□□□ 0.28
GABPB1Q06547 AC013467.2-201ENST00000605472 835 ntBASIC16.82■□□□□ 0.28
GABPB1Q06547 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 MIR600HG-201ENST00000449175 5984 ntBASIC16.82■□□□□ 0.28
GABPB1Q06547 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.82■□□□□ 0.28
GABPB1Q06547 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABPB1Q06547 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
GABPB1Q06547 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 Z82170.1-201ENST00000625081 3192 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GABPB1Q06547 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AC105250.1-201ENST00000509378 2057 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 AC097376.2-205ENST00000610159 5334 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GABPB1Q06547 FAM207BP-201ENST00000447172 505 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AC008040.2-201ENST00000461049 708 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GABPB1Q06547 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
GABPB1Q06547 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.81■□□□□ 0.28
GABPB1Q06547 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABPB1Q06547 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.81■□□□□ 0.28
GABPB1Q06547 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.81■□□□□ 0.28
GABPB1Q06547 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
GABPB1Q06547 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GABPB1Q06547 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
GABPB1Q06547 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.8■□□□□ 0.28
GABPB1Q06547 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.8■□□□□ 0.28
GABPB1Q06547 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABPB1Q06547 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.8■□□□□ 0.28
GABPB1Q06547 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.8■□□□□ 0.28
GABPB1Q06547 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 MIR4674-201ENST00000582457 87 ntBASIC16.8■□□□□ 0.28
GABPB1Q06547 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.8■□□□□ 0.28
GABPB1Q06547 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.8■□□□□ 0.28
GABPB1Q06547 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.8■□□□□ 0.28
GABPB1Q06547 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms