Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.58■□□□□ 0.4
CDR2Q01850 AL121894.2-201ENST00000602977 491 ntBASIC17.58■□□□□ 0.4
CDR2Q01850 AL009183.1-201ENST00000603760 355 ntBASIC17.58■□□□□ 0.4
CDR2Q01850 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.58■□□□□ 0.4
CDR2Q01850 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 AC005622.1-201ENST00000636801 1703 ntBASIC17.58■□□□□ 0.4
CDR2Q01850 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.57■□□□□ 0.4
CDR2Q01850 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDR2Q01850 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.57■□□□□ 0.4
CDR2Q01850 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.57■□□□□ 0.4
CDR2Q01850 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.57■□□□□ 0.4
CDR2Q01850 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.57■□□□□ 0.4
CDR2Q01850 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.57■□□□□ 0.4
CDR2Q01850 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDR2Q01850 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.57■□□□□ 0.4
CDR2Q01850 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDR2Q01850 AC025580.3-201ENST00000617932 1424 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDR2Q01850 BCAR1-209ENST00000546196 1340 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 AC022188.1-201ENST00000620960 1664 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDR2Q01850 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.56■□□□□ 0.4
CDR2Q01850 KRT18P2-201ENST00000447938 1258 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.56■□□□□ 0.4
CDR2Q01850 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.56■□□□□ 0.4
CDR2Q01850 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.56■□□□□ 0.4
CDR2Q01850 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 AC018845.2-201ENST00000568326 409 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.56■□□□□ 0.4
CDR2Q01850 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.56■□□□□ 0.4
CDR2Q01850 AC004877.2-201ENST00000623941 599 ntBASIC17.56■□□□□ 0.4
CDR2Q01850 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDR2Q01850 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDR2Q01850 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDR2Q01850 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms