Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 NOC2LP2-201ENST00000407594 1944 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCNA1P78396 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 FO393414.2-201ENST00000405153 598 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.59■□□□□ 0.57
CCNA1P78396 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.59■□□□□ 0.57
CCNA1P78396 ELK1P1-201ENST00000485699 580 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.59■□□□□ 0.57
CCNA1P78396 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.59■□□□□ 0.57
CCNA1P78396 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 AC092337.1-201ENST00000568699 1129 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 AC074044.1-201ENST00000609673 707 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 MIR6799-201ENST00000620297 69 ntBASIC18.59■□□□□ 0.57
CCNA1P78396 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.59■□□□□ 0.57
CCNA1P78396 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.59■□□□□ 0.57
CCNA1P78396 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNA1P78396 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNA1P78396 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCNA1P78396 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCNA1P78396 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CCNA1P78396 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.58■□□□□ 0.57
CCNA1P78396 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCNA1P78396 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
CCNA1P78396 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.58■□□□□ 0.57
CCNA1P78396 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNA1P78396 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCNA1P78396 MIR658-201ENST00000385210 100 ntBASIC18.58■□□□□ 0.56
CCNA1P78396 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCNA1P78396 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCNA1P78396 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.58■□□□□ 0.56
CCNA1P78396 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCNA1P78396 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.58■□□□□ 0.56
CCNA1P78396 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.58■□□□□ 0.56
CCNA1P78396 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CCNA1P78396 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.58■□□□□ 0.56
CCNA1P78396 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 AL365330.1-201ENST00000607459 531 ntBASIC18.58■□□□□ 0.56
CCNA1P78396 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCNA1P78396 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCNA1P78396 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.58■□□□□ 0.56
CCNA1P78396 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNA1P78396 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCNA1P78396 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNA1P78396 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNA1P78396 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCNA1P78396 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCNA1P78396 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNA1P78396 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.57■□□□□ 0.56
CCNA1P78396 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCNA1P78396 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCNA1P78396 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 AL589987.1-201ENST00000453380 819 ntBASIC18.57■□□□□ 0.56
CCNA1P78396 AC007389.4-201ENST00000454674 793 ntBASIC18.57■□□□□ 0.56
CCNA1P78396 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCNA1P78396 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.57■□□□□ 0.56
CCNA1P78396 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.57■□□□□ 0.56
CCNA1P78396 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms