Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRAMEP78395 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 PCGF3-213ENST00000620529 1899 ntBASIC16.66■□□□□ 0.26
PRAMEP78395 AL645728.2-201ENST00000641974 660 ntBASIC16.66■□□□□ 0.26
PRAMEP78395 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 CYP2T1P-202ENST00000641596 2535 ntBASIC16.66■□□□□ 0.26
PRAMEP78395 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEP78395 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEP78395 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEP78395 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.65■□□□□ 0.26
PRAMEP78395 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.65■□□□□ 0.26
PRAMEP78395 AL031432.2-201ENST00000566714 459 ntBASIC16.65■□□□□ 0.26
PRAMEP78395 AL928711.1-201ENST00000570165 459 ntBASIC16.65■□□□□ 0.26
PRAMEP78395 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEP78395 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEP78395 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.65■□□□□ 0.26
PRAMEP78395 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEP78395 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEP78395 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEP78395 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRAMEP78395 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEP78395 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEP78395 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEP78395 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.64■□□□□ 0.26
PRAMEP78395 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEP78395 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
PRAMEP78395 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRAMEP78395 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 HCG4B-203ENST00000450128 991 ntBASIC16.64■□□□□ 0.25
PRAMEP78395 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEP78395 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms