Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP1P78357 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP1P78357 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP1P78357 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP1P78357 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP1P78357 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNTNAP1P78357 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 RPL7P3-201ENST00000441388 714 ntBASIC19.34■□□□□ 0.69
CNTNAP1P78357 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 LDHBP1-201ENST00000455730 1119 ntBASIC19.34■□□□□ 0.69
CNTNAP1P78357 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 MIR4722-201ENST00000578292 60 ntBASIC19.34■□□□□ 0.69
CNTNAP1P78357 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP1P78357 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP1P78357 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 AP002490.2-201ENST00000524791 560 ntBASIC19.33■□□□□ 0.69
CNTNAP1P78357 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 AL022328.1-201ENST00000610050 478 ntBASIC19.33■□□□□ 0.69
CNTNAP1P78357 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 CLK3P2-201ENST00000427566 1453 ntBASIC19.33■□□□□ 0.69
CNTNAP1P78357 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNTNAP1P78357 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.33■□□□□ 0.69
CNTNAP1P78357 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CNTNAP1P78357 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP1P78357 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP1P78357 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP1P78357 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP1P78357 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CNTNAP1P78357 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP1P78357 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CNTNAP1P78357 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 AC026979.3-201ENST00000607315 403 ntBASIC19.32■□□□□ 0.68
CNTNAP1P78357 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CNTNAP1P78357 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP1P78357 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms