Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.6■□□□□ 0.09
GABREP78334 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 SLC7A15P-201ENST00000424028 1363 ntBASIC15.6■□□□□ 0.09
GABREP78334 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.59■□□□□ 0.09
GABREP78334 TTTY23B-201ENST00000442790 549 ntBASIC15.59■□□□□ 0.09
GABREP78334 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.59■□□□□ 0.09
GABREP78334 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.59■□□□□ 0.09
GABREP78334 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.59■□□□□ 0.09
GABREP78334 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.59■□□□□ 0.09
GABREP78334 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
GABREP78334 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 AL645608.8-201ENST00000606034 2086 ntBASIC15.59■□□□□ 0.09
GABREP78334 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GABREP78334 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.58■□□□□ 0.09
GABREP78334 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.58■□□□□ 0.09
GABREP78334 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GABREP78334 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GABREP78334 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GABREP78334 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
GABREP78334 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GABREP78334 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.58■□□□□ 0.08
GABREP78334 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.58■□□□□ 0.08
GABREP78334 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.58■□□□□ 0.08
GABREP78334 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
GABREP78334 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.58■□□□□ 0.08
GABREP78334 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GABREP78334 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.58■□□□□ 0.08
GABREP78334 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GABREP78334 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.58■□□□□ 0.08
GABREP78334 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GABREP78334 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GABREP78334 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABREP78334 AC116353.5-201ENST00000638148 1699 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms