Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 AL353692.3-201ENST00000407031 1396 ntBASIC14.82□□□□□ -0.04
VBP1P61758 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 AL031731.1-201ENST00000642131 2094 ntBASIC14.81□□□□□ -0.04
VBP1P61758 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.81□□□□□ -0.04
VBP1P61758 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 INGX-201ENST00000359239 846 ntBASIC14.81□□□□□ -0.04
VBP1P61758 AC103564.2-201ENST00000432853 1299 ntBASIC14.81□□□□□ -0.04
VBP1P61758 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 AC122714.2-201ENST00000502787 707 ntBASIC14.81□□□□□ -0.04
VBP1P61758 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.81□□□□□ -0.04
VBP1P61758 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.81□□□□□ -0.04
VBP1P61758 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.81□□□□□ -0.04
VBP1P61758 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.81□□□□□ -0.04
VBP1P61758 KRT8P49-201ENST00000604166 1432 ntBASIC14.81□□□□□ -0.04
VBP1P61758 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VBP1P61758 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VBP1P61758 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.81□□□□□ -0.04
VBP1P61758 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 AL512652.2-201ENST00000625156 1716 ntBASIC14.8□□□□□ -0.04
VBP1P61758 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.8□□□□□ -0.04
VBP1P61758 OR2I1P-210ENST00000642037 4691 ntBASIC14.8□□□□□ -0.04
VBP1P61758 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 IGHGP-201ENST00000390555 1178 ntBASIC14.8□□□□□ -0.04
VBP1P61758 AL390955.1-201ENST00000428694 934 ntBASIC14.8□□□□□ -0.04
VBP1P61758 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.8□□□□□ -0.04
VBP1P61758 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.8□□□□□ -0.04
VBP1P61758 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 AC092666.2-201ENST00000613287 246 ntBASIC14.8□□□□□ -0.04
VBP1P61758 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 AC113410.3-201ENST00000623366 203 ntBASIC14.8□□□□□ -0.04
VBP1P61758 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms