Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.79■□□□□ 0.12
VSX2P58304 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.78■□□□□ 0.12
VSX2P58304 FLJ38576-201ENST00000623820 2459 ntBASIC15.78■□□□□ 0.12
VSX2P58304 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.78■□□□□ 0.12
VSX2P58304 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.78■□□□□ 0.12
VSX2P58304 GGT4P-201ENST00000623672 1708 ntBASIC15.78■□□□□ 0.12
VSX2P58304 KRT18P32-201ENST00000424695 1287 ntBASIC15.78■□□□□ 0.12
VSX2P58304 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
VSX2P58304 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.78■□□□□ 0.12
VSX2P58304 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.78■□□□□ 0.12
VSX2P58304 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX2P58304 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.78■□□□□ 0.12
VSX2P58304 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
VSX2P58304 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
VSX2P58304 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX2P58304 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
VSX2P58304 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
VSX2P58304 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 AC092171.3-201ENST00000610122 2651 ntBASIC15.77■□□□□ 0.12
VSX2P58304 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.77■□□□□ 0.12
VSX2P58304 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.77■□□□□ 0.12
VSX2P58304 TSEN15P1-201ENST00000423257 515 ntBASIC15.77■□□□□ 0.12
VSX2P58304 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX2P58304 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX2P58304 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX2P58304 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX2P58304 KRT8P23-201ENST00000560090 1207 ntBASIC15.77■□□□□ 0.12
VSX2P58304 LINC01225-203ENST00000563550 1244 ntBASIC15.77■□□□□ 0.12
VSX2P58304 AC020765.3-201ENST00000613051 740 ntBASIC15.77■□□□□ 0.12
VSX2P58304 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.77■□□□□ 0.11
VSX2P58304 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
VSX2P58304 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
VSX2P58304 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 FER1L4-210ENST00000615531 5998 ntBASIC15.77■□□□□ 0.11
VSX2P58304 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
VSX2P58304 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
VSX2P58304 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
VSX2P58304 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
VSX2P58304 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX2P58304 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VSX2P58304 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX2P58304 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 AL162727.3-201ENST00000635661 2787 ntBASIC15.76■□□□□ 0.11
VSX2P58304 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 FAM58DP-201ENST00000428076 619 ntBASIC15.76■□□□□ 0.11
VSX2P58304 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.76■□□□□ 0.11
VSX2P58304 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.76■□□□□ 0.11
VSX2P58304 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms