Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.88□□□□□ -0.03
SUMO3P55854 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 AL592309.1-201ENST00000443127 649 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.88□□□□□ -0.03
SUMO3P55854 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 LINC01225-203ENST00000563550 1244 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.88□□□□□ -0.03
SUMO3P55854 AL138918.1-201ENST00000568306 659 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 AP000842.3-202ENST00000569238 1080 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 AC022145.2-201ENST00000598203 171 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.88□□□□□ -0.03
SUMO3P55854 SPTSSB-204ENST00000617024 1292 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 AC055717.3-201ENST00000622967 595 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SUMO3P55854 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
SUMO3P55854 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 AC124067.4-201ENST00000519691 2379 ntBASIC14.87□□□□□ -0.03
SUMO3P55854 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 MIR648-201ENST00000385046 94 ntBASIC14.87□□□□□ -0.03
SUMO3P55854 AC211486.1-202ENST00000416371 468 ntBASIC14.87□□□□□ -0.03
SUMO3P55854 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.87□□□□□ -0.03
SUMO3P55854 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.87□□□□□ -0.03
SUMO3P55854 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.87□□□□□ -0.03
SUMO3P55854 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.87□□□□□ -0.03
SUMO3P55854 AC211476.1-201ENST00000503899 468 ntBASIC14.87□□□□□ -0.03
SUMO3P55854 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 AC024267.1-201ENST00000582320 895 ntBASIC14.87□□□□□ -0.03
SUMO3P55854 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.87□□□□□ -0.03
SUMO3P55854 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SUMO3P55854 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SUMO3P55854 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.87□□□□□ -0.03
SUMO3P55854 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms