Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXG1P55316 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXG1P55316 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXG1P55316 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXG1P55316 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
FOXG1P55316 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXG1P55316 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 Z92544.3-201ENST00000624747 417 ntBASIC14.41□□□□□ -0.1
FOXG1P55316 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXG1P55316 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 OR6D1P-203ENST00000641209 4860 ntBASIC14.41□□□□□ -0.1
FOXG1P55316 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXG1P55316 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXG1P55316 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.4□□□□□ -0.1
FOXG1P55316 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXG1P55316 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXG1P55316 AL589702.1-201ENST00000641229 1509 ntBASIC14.4□□□□□ -0.1
FOXG1P55316 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXG1P55316 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXG1P55316 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.4□□□□□ -0.11
FOXG1P55316 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 AC008677.1-201ENST00000519230 1561 ntBASIC14.39□□□□□ -0.11
FOXG1P55316 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
FOXG1P55316 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXG1P55316 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXG1P55316 AC027796.2-201ENST00000575326 344 ntBASIC14.39□□□□□ -0.11
FOXG1P55316 AC106028.4-201ENST00000614509 607 ntBASIC14.39□□□□□ -0.11
FOXG1P55316 AP001059.3-201ENST00000619053 235 ntBASIC14.39□□□□□ -0.11
FOXG1P55316 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXG1P55316 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms