Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC25A1P53007 KRT18P67-201ENST00000432816 1264 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 CXCL1P1-201ENST00000502804 216 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 UNC93B7-201ENST00000509439 705 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC25A1P53007 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 AL031432.2-201ENST00000566714 459 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 AL928711.1-201ENST00000570165 459 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.64□□□□□ -0.07
SLC25A1P53007 AL121912.1-201ENST00000603683 238 ntBASIC14.64□□□□□ -0.07
SLC25A1P53007 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC25A1P53007 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC25A1P53007 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC25A1P53007 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SLC25A1P53007 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC25A1P53007 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC25A1P53007 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC25A1P53007 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC25A1P53007 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SLC25A1P53007 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC25A1P53007 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC25A1P53007 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
SLC25A1P53007 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC25A1P53007 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC25A1P53007 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SLC25A1P53007 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SLC25A1P53007 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC25A1P53007 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC25A1P53007 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.62□□□□□ -0.07
SLC25A1P53007 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC25A1P53007 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC25A1P53007 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC25A1P53007 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC25A1P53007 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SLC25A1P53007 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC25A1P53007 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms