Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX2-5P52952 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-5P52952 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 GGT3P-204ENST00000453783 1664 ntBASIC14.03□□□□□ -0.16
NKX2-5P52952 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-5P52952 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-5P52952 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-5P52952 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-5P52952 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-5P52952 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NKX2-5P52952 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 AC019294.4-201ENST00000561777 2905 ntBASIC14.02□□□□□ -0.16
NKX2-5P52952 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX2-5P52952 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NKX2-5P52952 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NKX2-5P52952 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX2-5P52952 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NKX2-5P52952 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.02□□□□□ -0.16
NKX2-5P52952 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX2-5P52952 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX2-5P52952 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX2-5P52952 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-5P52952 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NKX2-5P52952 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NKX2-5P52952 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-5P52952 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-5P52952 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-5P52952 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NKX2-5P52952 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-5P52952 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-5P52952 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 AC148477.4-201ENST00000613430 1793 ntBASIC14.01□□□□□ -0.17
NKX2-5P52952 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NKX2-5P52952 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-5P52952 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 PPT1-213ENST00000641319 2388 ntBASIC14.01□□□□□ -0.17
NKX2-5P52952 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-5P52952 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 AL512625.2-201ENST00000417533 625 ntBASIC14.01□□□□□ -0.17
NKX2-5P52952 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-5P52952 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-5P52952 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-5P52952 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.01□□□□□ -0.17
NKX2-5P52952 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-5P52952 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-5P52952 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms