Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 KRT223P-202ENST00000449164 1292 ntBASIC20.16■□□□□ 0.82
NUP98P52948 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.16■□□□□ 0.82
NUP98P52948 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.16■□□□□ 0.82
NUP98P52948 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NUP98P52948 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 BNIP3P1-202ENST00000550043 1585 ntBASIC20.16■□□□□ 0.82
NUP98P52948 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.16■□□□□ 0.82
NUP98P52948 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.16■□□□□ 0.82
NUP98P52948 AC036164.1-201ENST00000570544 333 ntBASIC20.16■□□□□ 0.82
NUP98P52948 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.16■□□□□ 0.82
NUP98P52948 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP98P52948 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.15■□□□□ 0.82
NUP98P52948 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.15■□□□□ 0.82
NUP98P52948 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NUP98P52948 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.15■□□□□ 0.82
NUP98P52948 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.15■□□□□ 0.82
NUP98P52948 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NUP98P52948 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 AC004987.2-201ENST00000395959 1148 ntBASIC20.15■□□□□ 0.82
NUP98P52948 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NUP98P52948 AL162726.2-201ENST00000438986 1017 ntBASIC20.15■□□□□ 0.82
NUP98P52948 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.15■□□□□ 0.82
NUP98P52948 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.15■□□□□ 0.82
NUP98P52948 HNRNPUP1-201ENST00000554987 333 ntBASIC20.15■□□□□ 0.82
NUP98P52948 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.15■□□□□ 0.82
NUP98P52948 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.15■□□□□ 0.82
NUP98P52948 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP98P52948 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.14■□□□□ 0.82
NUP98P52948 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NUP98P52948 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.14■□□□□ 0.82
NUP98P52948 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NUP98P52948 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
NUP98P52948 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
NUP98P52948 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.14■□□□□ 0.82
NUP98P52948 AC005332.8-201ENST00000622750 2735 ntBASIC20.14■□□□□ 0.82
NUP98P52948 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.14■□□□□ 0.81
NUP98P52948 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NUP98P52948 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
NUP98P52948 AL442647.2-201ENST00000429864 857 ntBASIC20.14■□□□□ 0.81
NUP98P52948 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.14■□□□□ 0.81
NUP98P52948 RN7SL399P-201ENST00000471648 279 ntBASIC20.14■□□□□ 0.81
NUP98P52948 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NUP98P52948 AC243562.2-201ENST00000561247 970 ntBASIC20.14■□□□□ 0.81
NUP98P52948 AC015936.2-201ENST00000593177 259 ntBASIC20.14■□□□□ 0.81
NUP98P52948 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.14■□□□□ 0.81
NUP98P52948 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.14■□□□□ 0.81
NUP98P52948 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.14■□□□□ 0.81
NUP98P52948 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.14■□□□□ 0.81
NUP98P52948 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.14■□□□□ 0.81
NUP98P52948 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NUP98P52948 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUP98P52948 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.14■□□□□ 0.81
NUP98P52948 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.14■□□□□ 0.81
NUP98P52948 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NUP98P52948 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP98P52948 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUP98P52948 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.13■□□□□ 0.81
NUP98P52948 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.13■□□□□ 0.81
NUP98P52948 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP98P52948 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.13■□□□□ 0.81
NUP98P52948 AP005482.1-201ENST00000563722 1273 ntBASIC20.13■□□□□ 0.81
NUP98P52948 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.13■□□□□ 0.81
NUP98P52948 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.13■□□□□ 0.81
NUP98P52948 MIR4259-201ENST00000584466 101 ntBASIC20.13■□□□□ 0.81
NUP98P52948 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.13■□□□□ 0.81
NUP98P52948 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.13■□□□□ 0.81
NUP98P52948 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.13■□□□□ 0.81
NUP98P52948 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUP98P52948 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.13■□□□□ 0.81
NUP98P52948 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP98P52948 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms