Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.24□□□□□ -0.13
HCFC1P51610 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.24□□□□□ -0.13
HCFC1P51610 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 AC092337.1-201ENST00000568699 1129 ntBASIC14.24□□□□□ -0.13
HCFC1P51610 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 AC099568.2-201ENST00000609194 695 ntBASIC14.24□□□□□ -0.13
HCFC1P51610 AC004461.2-201ENST00000629517 803 ntBASIC14.24□□□□□ -0.13
HCFC1P51610 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 NKILA-202ENST00000614771 2598 ntBASIC14.24□□□□□ -0.13
HCFC1P51610 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.24□□□□□ -0.13
HCFC1P51610 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HCFC1P51610 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.24□□□□□ -0.13
HCFC1P51610 AP005482.1-201ENST00000563722 1273 ntBASIC14.24□□□□□ -0.13
HCFC1P51610 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HCFC1P51610 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
HCFC1P51610 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
HCFC1P51610 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 AC006277.1-201ENST00000624348 1610 ntBASIC14.23□□□□□ -0.13
HCFC1P51610 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.23□□□□□ -0.13
HCFC1P51610 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 AL162274.1-201ENST00000617191 1098 ntBASIC14.23□□□□□ -0.13
HCFC1P51610 AL033527.5-202ENST00000641632 1098 ntBASIC14.23□□□□□ -0.13
HCFC1P51610 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.23□□□□□ -0.13
HCFC1P51610 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HCFC1P51610 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
HCFC1P51610 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCFC1P51610 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.22□□□□□ -0.13
HCFC1P51610 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 MIR658-201ENST00000385210 100 ntBASIC14.22□□□□□ -0.13
HCFC1P51610 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.22□□□□□ -0.13
HCFC1P51610 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.22□□□□□ -0.13
HCFC1P51610 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms