Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 AC012569.1-201ENST00000591191 1524 ntBASIC17.82■□□□□ 0.44
PDE6CP51160 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6CP51160 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6CP51160 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6CP51160 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 SNHG9-202ENST00000564014 471 ntBASIC17.82■□□□□ 0.44
PDE6CP51160 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.82■□□□□ 0.44
PDE6CP51160 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.82■□□□□ 0.44
PDE6CP51160 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 ACTL9-202ENST00000612068 1252 ntBASIC17.82■□□□□ 0.44
PDE6CP51160 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.82■□□□□ 0.44
PDE6CP51160 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDE6CP51160 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PDE6CP51160 ELL2P1-201ENST00000413990 1906 ntBASIC17.82■□□□□ 0.44
PDE6CP51160 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDE6CP51160 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.82■□□□□ 0.44
PDE6CP51160 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDE6CP51160 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PDE6CP51160 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PDE6CP51160 DNAJB3-202ENST00000449667 1266 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 AL513480.1-201ENST00000451731 511 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6CP51160 ALG1L5P-201ENST00000482043 771 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.81■□□□□ 0.44
PDE6CP51160 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6CP51160 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 AC068137.2-201ENST00000605408 478 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.81■□□□□ 0.44
PDE6CP51160 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6CP51160 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDE6CP51160 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 GPAA1P2-202ENST00000606848 1787 ntBASIC17.81■□□□□ 0.44
PDE6CP51160 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6CP51160 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6CP51160 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.8■□□□□ 0.44
PDE6CP51160 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.8■□□□□ 0.44
PDE6CP51160 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDE6CP51160 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6CP51160 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6CP51160 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6CP51160 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PDE6CP51160 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6CP51160 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6CP51160 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDE6CP51160 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms