Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASP4P49662 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASP4P49662 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.93■□□□□ 0.46
CASP4P49662 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.93■□□□□ 0.46
CASP4P49662 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.93■□□□□ 0.46
CASP4P49662 AC010327.4-202ENST00000591484 748 ntBASIC17.93■□□□□ 0.46
CASP4P49662 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
CASP4P49662 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 AL161645.1-201ENST00000622716 1255 ntBASIC17.93■□□□□ 0.46
CASP4P49662 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.93■□□□□ 0.46
CASP4P49662 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.93■□□□□ 0.46
CASP4P49662 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASP4P49662 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CASP4P49662 AL592424.1-201ENST00000563624 1536 ntBASIC17.93■□□□□ 0.46
CASP4P49662 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 AL355306.1-201ENST00000415580 579 ntBASIC17.92■□□□□ 0.46
CASP4P49662 ADH5P3-201ENST00000433842 1137 ntBASIC17.92■□□□□ 0.46
CASP4P49662 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.92■□□□□ 0.46
CASP4P49662 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.92■□□□□ 0.46
CASP4P49662 MTDHP5-201ENST00000598980 586 ntBASIC17.92■□□□□ 0.46
CASP4P49662 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CASP4P49662 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.92■□□□□ 0.46
CASP4P49662 C20orf181-201ENST00000623918 480 ntBASIC17.92■□□□□ 0.46
CASP4P49662 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CASP4P49662 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CASP4P49662 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CASP4P49662 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.92■□□□□ 0.46
CASP4P49662 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASP4P49662 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 BX842568.4-201ENST00000421222 227 ntBASIC17.91■□□□□ 0.46
CASP4P49662 HTR5BP-201ENST00000430851 1154 ntBASIC17.91■□□□□ 0.46
CASP4P49662 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 RARRES2P8-201ENST00000566335 367 ntBASIC17.91■□□□□ 0.46
CASP4P49662 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms