Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.5■□□□□ 0.23
ARCN1P48444 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
ARCN1P48444 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
ARCN1P48444 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ARCN1P48444 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARCN1P48444 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARCN1P48444 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.49■□□□□ 0.23
ARCN1P48444 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
ARCN1P48444 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ARCN1P48444 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 AC109635.5-201ENST00000533593 962 ntBASIC16.49■□□□□ 0.23
ARCN1P48444 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.49■□□□□ 0.23
ARCN1P48444 AC040169.1-201ENST00000565382 521 ntBASIC16.49■□□□□ 0.23
ARCN1P48444 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 AL592424.1-201ENST00000563624 1536 ntBASIC16.49■□□□□ 0.23
ARCN1P48444 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ARCN1P48444 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARCN1P48444 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
ARCN1P48444 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 BCAR1-209ENST00000546196 1340 ntBASIC16.48■□□□□ 0.23
ARCN1P48444 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.48■□□□□ 0.23
ARCN1P48444 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.48■□□□□ 0.23
ARCN1P48444 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.48■□□□□ 0.23
ARCN1P48444 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.48■□□□□ 0.23
ARCN1P48444 AL009183.1-201ENST00000603760 355 ntBASIC16.48■□□□□ 0.23
ARCN1P48444 AC023141.13-201ENST00000604991 943 ntBASIC16.48■□□□□ 0.23
ARCN1P48444 AC004877.2-201ENST00000623941 599 ntBASIC16.48■□□□□ 0.23
ARCN1P48444 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ARCN1P48444 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ARCN1P48444 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARCN1P48444 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ARCN1P48444 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms