Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 AC092384.3-202ENST00000564646 2873 ntBASIC14.57□□□□□ -0.08
SOX2P48431 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 REXO1L8P-201ENST00000604378 1897 ntBASIC14.57□□□□□ -0.08
SOX2P48431 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.57□□□□□ -0.08
SOX2P48431 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.57□□□□□ -0.08
SOX2P48431 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.57□□□□□ -0.08
SOX2P48431 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.57□□□□□ -0.08
SOX2P48431 AC092329.2-201ENST00000598402 547 ntBASIC14.57□□□□□ -0.08
SOX2P48431 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.57□□□□□ -0.08
SOX2P48431 AL590326.2-201ENST00000625139 305 ntBASIC14.57□□□□□ -0.08
SOX2P48431 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.57□□□□□ -0.08
SOX2P48431 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SOX2P48431 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.57□□□□□ -0.08
SOX2P48431 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.56□□□□□ -0.08
SOX2P48431 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.56□□□□□ -0.08
SOX2P48431 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 AP003680.1-201ENST00000598970 3660 ntBASIC14.56□□□□□ -0.08
SOX2P48431 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.56□□□□□ -0.08
SOX2P48431 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SOX2P48431 PCED1CP-201ENST00000419887 785 ntBASIC14.56□□□□□ -0.08
SOX2P48431 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.56□□□□□ -0.08
SOX2P48431 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
SOX2P48431 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 NCF1C-201ENST00000438382 1427 ntBASIC14.56□□□□□ -0.08
SOX2P48431 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SOX2P48431 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX2P48431 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.56□□□□□ -0.08
SOX2P48431 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX2P48431 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX2P48431 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
SOX2P48431 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms