Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX2-1P43699 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 HOMER2P1-201ENST00000455653 964 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX2-1P43699 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX2-1P43699 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.55□□□□□ -0.24
NKX2-1P43699 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC139887.4-201ENST00000607877 719 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 IGHV3-41-201ENST00000613121 348 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 AL031731.1-201ENST00000642131 2094 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX2-1P43699 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX2-1P43699 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NKX2-1P43699 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.54□□□□□ -0.24
NKX2-1P43699 AL512652.2-201ENST00000625156 1716 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 TNRC18P2-201ENST00000417666 2714 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
NKX2-1P43699 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 RNF152P1-201ENST00000397754 604 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 AL020989.1-201ENST00000422979 469 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 AL845331.1-201ENST00000424978 1190 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 AC117947.1-201ENST00000427448 529 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX2-1P43699 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX2-1P43699 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 AC090616.6-201ENST00000582640 721 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 AC011467.2-201ENST00000598425 242 ntBASIC13.54□□□□□ -0.24
NKX2-1P43699 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NKX2-1P43699 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX2-1P43699 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX2-1P43699 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX2-1P43699 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-1P43699 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-1P43699 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX2-1P43699 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NKX2-1P43699 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-1P43699 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-1P43699 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms