Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC136632.2-201ENST00000512891 861 ntBASIC17.6■□□□□ 0.41
SSR1P43307 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.6■□□□□ 0.41
SSR1P43307 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 AC013467.2-201ENST00000605472 835 ntBASIC17.6■□□□□ 0.41
SSR1P43307 TP73-AS1-207ENST00000624167 988 ntBASIC17.6■□□□□ 0.41
SSR1P43307 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.6■□□□□ 0.41
SSR1P43307 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.6■□□□□ 0.41
SSR1P43307 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SSR1P43307 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
SSR1P43307 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SSR1P43307 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SSR1P43307 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SSR1P43307 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.6■□□□□ 0.41
SSR1P43307 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SSR1P43307 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSR1P43307 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.59■□□□□ 0.41
SSR1P43307 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
SSR1P43307 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.59■□□□□ 0.41
SSR1P43307 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 AF186996.4-201ENST00000467186 377 ntBASIC17.59■□□□□ 0.41
SSR1P43307 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.59■□□□□ 0.41
SSR1P43307 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSR1P43307 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SSR1P43307 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.58■□□□□ 0.41
SSR1P43307 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.58■□□□□ 0.41
SSR1P43307 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 AC131009.4-201ENST00000624048 1740 ntBASIC17.58■□□□□ 0.41
SSR1P43307 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.58■□□□□ 0.41
SSR1P43307 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.58■□□□□ 0.41
SSR1P43307 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.58■□□□□ 0.41
SSR1P43307 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.58■□□□□ 0.41
SSR1P43307 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SSR1P43307 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.58■□□□□ 0.41
SSR1P43307 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSR1P43307 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.58■□□□□ 0.41
SSR1P43307 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SSR1P43307 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SSR1P43307 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 AL121912.1-201ENST00000603683 238 ntBASIC17.58■□□□□ 0.4
SSR1P43307 GGTLC5P-201ENST00000617623 998 ntBASIC17.58■□□□□ 0.4
SSR1P43307 REXO1L3P-201ENST00000622202 1288 ntBASIC17.58■□□□□ 0.4
SSR1P43307 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.58■□□□□ 0.4
SSR1P43307 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms