Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SLC1A1P43005 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 AC112504.1-201ENST00000623415 1841 ntBASIC17.25■□□□□ 0.35
SLC1A1P43005 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A1P43005 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A1P43005 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 AC069224.1-201ENST00000566372 1715 ntBASIC17.24■□□□□ 0.35
SLC1A1P43005 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 AC098831.1-202ENST00000438821 336 ntBASIC17.24■□□□□ 0.35
SLC1A1P43005 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A1P43005 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A1P43005 AP002469.2-201ENST00000531724 424 ntBASIC17.24■□□□□ 0.35
SLC1A1P43005 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SLC1A1P43005 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 MIR7706-201ENST00000613747 67 ntBASIC17.24■□□□□ 0.35
SLC1A1P43005 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLC1A1P43005 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A1P43005 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A1P43005 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A1P43005 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A1P43005 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC1A1P43005 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC1A1P43005 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 CRYGEP-201ENST00000412192 528 ntBASIC17.23■□□□□ 0.35
SLC1A1P43005 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 AC009947.1-201ENST00000444350 727 ntBASIC17.23■□□□□ 0.35
SLC1A1P43005 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC1A1P43005 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A1P43005 AC104692.2-201ENST00000603054 253 ntBASIC17.23■□□□□ 0.35
SLC1A1P43005 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A1P43005 AL031008.1-201ENST00000619963 541 ntBASIC17.23■□□□□ 0.35
SLC1A1P43005 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC1A1P43005 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A1P43005 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC1A1P43005 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A1P43005 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A1P43005 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms