Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 GGT3P-204ENST00000453783 1664 ntBASIC15.19■□□□□ 0.02
SLC1A3P43003 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC1A3P43003 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.19■□□□□ 0.02
SLC1A3P43003 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC1A3P43003 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A3P43003 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 HCG4B-203ENST00000450128 991 ntBASIC15.19■□□□□ 0.02
SLC1A3P43003 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC1A3P43003 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC1A3P43003 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC1A3P43003 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 AL645728.2-201ENST00000641974 660 ntBASIC15.19■□□□□ 0.02
SLC1A3P43003 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC1A3P43003 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC1A3P43003 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC1A3P43003 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A3P43003 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC1A3P43003 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC1A3P43003 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SLC1A3P43003 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 AL513480.1-201ENST00000451731 511 ntBASIC15.18■□□□□ 0.02
SLC1A3P43003 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.18■□□□□ 0.02
SLC1A3P43003 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC1A3P43003 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 AC145285.3-201ENST00000564603 959 ntBASIC15.18■□□□□ 0.02
SLC1A3P43003 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.18■□□□□ 0.02
SLC1A3P43003 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC1A3P43003 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC1A3P43003 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A3P43003 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A3P43003 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A3P43003 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A3P43003 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 GGT4P-201ENST00000623672 1708 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms