Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXC12P31275 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 AL391256.1-201ENST00000443260 1855 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HOXC12P31275 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 AC015922.1-201ENST00000421102 1152 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXC12P31275 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HOXC12P31275 HLA-J-202ENST00000469281 1241 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXC12P31275 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.64□□□□□ -0.07
HOXC12P31275 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXC12P31275 AC109635.5-201ENST00000533593 962 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 AC093520.2-201ENST00000561830 333 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 AL390955.2-201ENST00000603032 514 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 AL009183.1-201ENST00000603760 355 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 AC013467.2-201ENST00000605472 835 ntBASIC14.64□□□□□ -0.07
HOXC12P31275 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXC12P31275 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.63□□□□□ -0.07
HOXC12P31275 PCDHB17P-201ENST00000539533 2393 ntBASIC14.63□□□□□ -0.07
HOXC12P31275 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HOXC12P31275 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.63□□□□□ -0.07
HOXC12P31275 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HOXC12P31275 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.63□□□□□ -0.07
HOXC12P31275 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.63□□□□□ -0.07
HOXC12P31275 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.63□□□□□ -0.07
HOXC12P31275 AC067863.1-201ENST00000494933 530 ntBASIC14.63□□□□□ -0.07
HOXC12P31275 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
HOXC12P31275 RARRES2P8-201ENST00000566335 367 ntBASIC14.63□□□□□ -0.07
HOXC12P31275 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.63□□□□□ -0.07
HOXC12P31275 NORAD-201ENST00000565493 5339 ntBASIC14.63□□□□□ -0.07
HOXC12P31275 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HOXC12P31275 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HOXC12P31275 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.63□□□□□ -0.07
HOXC12P31275 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HOXC12P31275 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HOXC12P31275 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms