Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.69■□□□□ 0.58
CNGA1P29973 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.69■□□□□ 0.58
CNGA1P29973 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CNGA1P29973 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.69■□□□□ 0.58
CNGA1P29973 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.69■□□□□ 0.58
CNGA1P29973 RN7SL752P-201ENST00000463779 287 ntBASIC18.69■□□□□ 0.58
CNGA1P29973 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CNGA1P29973 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.69■□□□□ 0.58
CNGA1P29973 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.69■□□□□ 0.58
CNGA1P29973 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.69■□□□□ 0.58
CNGA1P29973 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CNGA1P29973 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 AC092068.3-201ENST00000587894 2016 ntBASIC18.69■□□□□ 0.58
CNGA1P29973 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNGA1P29973 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CNGA1P29973 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNGA1P29973 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 TNRC18P3-201ENST00000441896 2691 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 AC080080.1-201ENST00000625121 2420 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 AP006294.1-201ENST00000415407 339 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 RNA5SP410-201ENST00000516285 106 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CNGA1P29973 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
CNGA1P29973 AC010336.2-201ENST00000564226 506 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 MIR4492-201ENST00000581627 80 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 AC017083.2-201ENST00000608069 979 ntBASIC18.68■□□□□ 0.58
CNGA1P29973 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CNGA1P29973 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.68■□□□□ 0.58
CNGA1P29973 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.68■□□□□ 0.58
CNGA1P29973 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.68■□□□□ 0.58
CNGA1P29973 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNGA1P29973 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CNGA1P29973 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CNGA1P29973 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CNGA1P29973 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.67■□□□□ 0.58
CNGA1P29973 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.67■□□□□ 0.58
CNGA1P29973 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.67■□□□□ 0.58
CNGA1P29973 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.67■□□□□ 0.58
CNGA1P29973 AC105021.1-202ENST00000570572 669 ntBASIC18.67■□□□□ 0.58
CNGA1P29973 IGHV3-72-202ENST00000621503 303 ntBASIC18.67■□□□□ 0.58
CNGA1P29973 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CNGA1P29973 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.67■□□□□ 0.58
CNGA1P29973 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
CNGA1P29973 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.67■□□□□ 0.58
CNGA1P29973 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNGA1P29973 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms