Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 AC020916.1-201ENST00000587762 1774 ntBASIC16.61■□□□□ 0.25
XPAP23025 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 AC063926.3-201ENST00000624734 5658 ntBASIC16.61■□□□□ 0.25
XPAP23025 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 RBPMS2P1-201ENST00000437762 623 ntBASIC16.61■□□□□ 0.25
XPAP23025 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 AC105233.2-201ENST00000523697 349 ntBASIC16.61■□□□□ 0.25
XPAP23025 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 AF228730.5-201ENST00000530288 346 ntBASIC16.61■□□□□ 0.25
XPAP23025 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 AC009093.7-201ENST00000623853 1223 ntBASIC16.61■□□□□ 0.25
XPAP23025 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
XPAP23025 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
XPAP23025 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.61■□□□□ 0.25
XPAP23025 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
XPAP23025 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
XPAP23025 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
XPAP23025 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
XPAP23025 GPAA1P2-202ENST00000606848 1787 ntBASIC16.6■□□□□ 0.25
XPAP23025 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.6■□□□□ 0.25
XPAP23025 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
XPAP23025 AC093520.2-201ENST00000561830 333 ntBASIC16.6■□□□□ 0.25
XPAP23025 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.6■□□□□ 0.25
XPAP23025 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.6■□□□□ 0.25
XPAP23025 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 AC080080.1-201ENST00000625121 2420 ntBASIC16.6■□□□□ 0.25
XPAP23025 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XPAP23025 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
XPAP23025 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms