Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.71■□□□□ 0.75
NCLP19338 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.71■□□□□ 0.75
NCLP19338 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.71■□□□□ 0.75
NCLP19338 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLP19338 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.71■□□□□ 0.75
NCLP19338 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.7■□□□□ 0.74
NCLP19338 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
NCLP19338 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.7■□□□□ 0.74
NCLP19338 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NCLP19338 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.7■□□□□ 0.74
NCLP19338 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.7■□□□□ 0.74
NCLP19338 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.7■□□□□ 0.74
NCLP19338 KRT16P4-201ENST00000453883 522 ntBASIC19.7■□□□□ 0.74
NCLP19338 MINOS1P3-201ENST00000457048 203 ntBASIC19.7■□□□□ 0.74
NCLP19338 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.7■□□□□ 0.74
NCLP19338 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 AC011467.2-201ENST00000598425 242 ntBASIC19.7■□□□□ 0.74
NCLP19338 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.7■□□□□ 0.74
NCLP19338 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NCLP19338 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NCLP19338 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCLP19338 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NCLP19338 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.69■□□□□ 0.74
NCLP19338 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NCLP19338 POM121L3P-201ENST00000419331 1163 ntBASIC19.69■□□□□ 0.74
NCLP19338 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.69■□□□□ 0.74
NCLP19338 FDX1P1-201ENST00000449115 551 ntBASIC19.69■□□□□ 0.74
NCLP19338 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.69■□□□□ 0.74
NCLP19338 AD001527.2-201ENST00000622994 785 ntBASIC19.69■□□□□ 0.74
NCLP19338 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NCLP19338 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NCLP19338 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NCLP19338 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCLP19338 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 TP73-AS1-210ENST00000637775 1455 ntBASIC19.68■□□□□ 0.74
NCLP19338 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC19.68■□□□□ 0.74
NCLP19338 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
NCLP19338 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NCLP19338 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
NCLP19338 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCLP19338 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCLP19338 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.68■□□□□ 0.74
NCLP19338 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.68■□□□□ 0.74
NCLP19338 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms