Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 AC116407.3-201ENST00000623905 1129 ntBASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 PAUPAR-201ENST00000630360 2965 ntBASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV3-43DP0DP04 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 HCG4-201ENST00000418983 998 ntBASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 PCGF3-213ENST00000620529 1899 ntBASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 AC012569.1-201ENST00000591191 1524 ntBASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 GPAA1P2-202ENST00000606848 1787 ntBASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV3-43DP0DP04 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms