Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.18■□□□□ 0.02
THBS1P07996 Z83851.2-201ENST00000609564 659 ntBASIC15.18■□□□□ 0.02
THBS1P07996 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
THBS1P07996 AC010507.1-201ENST00000633895 436 ntBASIC15.18■□□□□ 0.02
THBS1P07996 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 LINC02199-201ENST00000506655 2702 ntBASIC15.18■□□□□ 0.02
THBS1P07996 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 AC024909.3-201ENST00000611513 2257 ntBASIC15.18■□□□□ 0.02
THBS1P07996 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.18■□□□□ 0.02
THBS1P07996 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.18■□□□□ 0.02
THBS1P07996 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
THBS1P07996 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
THBS1P07996 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
THBS1P07996 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
THBS1P07996 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 KRT18P13-201ENST00000400056 1290 ntBASIC15.17■□□□□ 0.02
THBS1P07996 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THBS1P07996 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.17■□□□□ 0.02
THBS1P07996 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.17■□□□□ 0.02
THBS1P07996 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 Z99916.3-201ENST00000623422 1080 ntBASIC15.17■□□□□ 0.02
THBS1P07996 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 AC007064.4-201ENST00000637740 555 ntBASIC15.17■□□□□ 0.02
THBS1P07996 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.17■□□□□ 0.02
THBS1P07996 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
THBS1P07996 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.17■□□□□ 0.02
THBS1P07996 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THBS1P07996 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
THBS1P07996 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.16■□□□□ 0.02
THBS1P07996 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.16■□□□□ 0.02
THBS1P07996 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.16■□□□□ 0.02
THBS1P07996 AL009183.1-201ENST00000603760 355 ntBASIC15.16■□□□□ 0.02
THBS1P07996 AC023141.13-201ENST00000604991 943 ntBASIC15.16■□□□□ 0.02
THBS1P07996 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.16■□□□□ 0.02
THBS1P07996 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
THBS1P07996 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms