Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
APOBP04114 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 RN7SL769P-201ENST00000469386 295 ntBASIC10.05□□□□□ -0.8
APOBP04114 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.05□□□□□ -0.8
APOBP04114 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 EIF4HP1-201ENST00000453115 687 ntBASIC10.05□□□□□ -0.8
APOBP04114 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 CFL1-214ENST00000534769 758 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.05□□□□□ -0.8
APOBP04114 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.05□□□□□ -0.8
APOBP04114 AF254983.2-201ENST00000612331 135 ntBASIC10.05□□□□□ -0.8
APOBP04114 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.05□□□□□ -0.8
APOBP04114 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 AL391256.1-201ENST00000443260 1855 ntBASIC10.05□□□□□ -0.8
APOBP04114 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.05□□□□□ -0.8
APOBP04114 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOBP04114 AC009053.2-201ENST00000563701 2365 ntBASIC10.04□□□□□ -0.8
APOBP04114 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC10.04□□□□□ -0.8
APOBP04114 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.04□□□□□ -0.8
APOBP04114 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 FGFR3P5-201ENST00000564496 886 ntBASIC10.04□□□□□ -0.8
APOBP04114 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 PFN1P12-201ENST00000455938 534 ntBASIC10.04□□□□□ -0.8
APOBP04114 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 AC000095.1-201ENST00000603208 874 ntBASIC10.04□□□□□ -0.8
APOBP04114 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.04□□□□□ -0.8
APOBP04114 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
APOBP04114 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOBP04114 TOMM22P5-201ENST00000416399 439 ntBASIC10.04□□□□□ -0.8
APOBP04114 AC005077.2-201ENST00000449786 690 ntBASIC10.04□□□□□ -0.8
APOBP04114 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.04□□□□□ -0.8
APOBP04114 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.04□□□□□ -0.8
APOBP04114 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms